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INTERNATIONAL JOURNAL OF CREATIVE RESEARCH THOUGHTS - IJCRT (IJCRT.ORG)

International Peer Reviewed & Refereed Journals, Open Access Journal

IJCRT Peer-Reviewed (Refereed) Journal as Per New UGC Rules.

ISSN Approved Journal No: 2320-2882 | Impact factor: 7.97 | ESTD Year: 2013

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  Published Paper Details:

  Paper Title

Structural and functional sequence analysis of amylase - producing halophilic actinomycetes using bioinformatics approaches

  Authors

  Ashish B. Kalasava,  Kruti G. Dangar,  Dr. Geera P. Mankad

  Keywords

Halophilic actinomycetes; Actinopolyspora erythraea; Amylases; Bioinformatics analysis; Protein structure prediction

  Abstract


Halophilic actinomycetes are valuable sources of extremozymes with significant industrial potential due to their Sustain ability and function under high salinity and other harsh conditions. In this study, we conducted comprehensive bioinformatics-based structural and functional analysis on four amylase sequences from the halophilic actinomycetes Actinopolyspora erythraea, including ?-glucosidase, glycosidase and two hypothetical proteins. We retrieved four amino acid sequences from the NCBI database. Sequences were analysed by using ProtParam to determine physicochemical properties associated with halophilic adaptation. Three-dimensional structures were predicted using SWISS-MODEL and validated through Global Model Quality Estimation (GMQE), QMEAN Z-score, MolProbity and Ramachandran plot to capture the novelty of amylases. All analysed proteins exhibited hallmark features of halophilic enzymes, including low theoretical isoelectric points, enrichment of acidic amino acids, negative GRAVY values indicating enhanced hydrophilicity, and moderate to high aliphatic indices suggestive of thermostability. The ?-glucosidase and glycosidase proteins demonstrated favourable stability indices and structural robustness, supporting their primary roles in carbohydrate metabolism under hypersaline conditions. Overall, this study highlights key molecular determinants underlying halophilic adaptation in amylase-related proteins from Actinopolyspora erythraea and underscores the biotechnological potential of halophilic actinomycetes as promising sources of salt-tolerant enzymes for applications in the food, detergent, and pharmaceutical industries.

  IJCRT's Publication Details

  Unique Identification Number - IJCRT1136201

  Paper ID - 299907

  Page Number(s) - 427-433

  Pubished in - Volume 7 | Issue 1 | January 2019

  DOI (Digital Object Identifier) -    https://doi.org/10.56975/ijcrt.v7i1.299907

  Publisher Name - IJCRT | www.ijcrt.org | ISSN : 2320-2882

  E-ISSN Number - 2320-2882

  Cite this article

  Ashish B. Kalasava,  Kruti G. Dangar,  Dr. Geera P. Mankad,   "Structural and functional sequence analysis of amylase - producing halophilic actinomycetes using bioinformatics approaches", International Journal of Creative Research Thoughts (IJCRT), ISSN:2320-2882, Volume.7, Issue 1, pp.427-433, January 2019, Available at :http://www.ijcrt.org/papers/IJCRT1136201.pdf

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Call For Paper March 2026
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ISSN and 7.97 Impact Factor Details


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ISSN
ISSN: 2320-2882
Impact Factor: 7.97 and ISSN APPROVED
Journal Starting Year (ESTD) : 2013
ISSN
ISSN and 7.97 Impact Factor Details


ISSN
ISSN
ISSN: 2320-2882
Impact Factor: 7.97 and ISSN APPROVED
Journal Starting Year (ESTD) : 2013
ISSN
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