ISSN2320-2882
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Paper Title

"Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"

Authors

Ruchit V. tumbada , Prathamesh R. Awade , Ajinkya Pawar , Tufail Dana , M.B.Nikam

Keywords

Molecular Docking, Drug Discovery, Structure-Based Drug Design (SBDD), Virtual Screening, Scoring Functions, Artificial Intelligence, Molecular Dynamics, Computational Pharmacology, Binding Affinity, Therapeutic Discovery

Abstract

Molecular docking has become a cornerstone technique in structure-based drug design (SBDD), allowing researchers to predict the interaction and binding affinity between a small molecule (ligand) and a biological macromolecule (receptor). Over the past two decades, rapid advances in computational biology, structural genomics, and artificial intelligence have transformed molecular docking into a highly efficient and accurate method for virtual screening, lead optimization, and mechanism elucidation. This review provides a comprehensive overview of the principles, mechanisms, and recent advancements in molecular docking, emphasizing its application in modern therapeutic discovery. It discusses the basic workflow of docking, including target preparation, ligand optimization, binding site analysis, scoring functions, and result validation. Furthermore, recent developments such as flexible docking algorithms, molecular dynamics-coupled docking, and AI-driven predictive models are highlighted for their impact on improving docking accuracy and computational efficiency. The article also explores the role of molecular docking in identifying potential leads against diseases such as cancer, diabetes, neurodegenerative disorders, and viral infections. By bridging theoretical chemistry and pharmaceutical innovation, molecular docking continues to play an essential role in accelerating the drug discovery pipeline and shaping the future of personalized medicine.

How To Cite

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IJCRT — journal style
""Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"", IJCRT - International Journal of Creative Research Thoughts (www.ijcrt.org), ISSN:2320-2882, Vol.13, Issue 11, page no.g59-g69, November 2025, Available :https://ijcrt.org/papers/IJCRT2511716.pdf
APA — 7th edition
tumbada, R. V., Awade, P. R., Pawar, A., Dana, T., & M.B.Nikam. (2025). "Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery". International Journal of Creative Research Thoughts, 13(11), g59-g69. https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716
MLA — 9th edition
tumbada, Ruchit V., et al. ""Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"." International Journal of Creative Research Thoughts, vol. 13, no. 11, 2025, pp. g59-g69, https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716.
Chicago — 17th, bibliography
tumbada, Ruchit V., et al. ""Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"." International Journal of Creative Research Thoughts 13, no. 11 (2025): g59-g69. https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716.
Harvard — author–date
tumbada, R.V. et al. (2025) '"Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"', International Journal of Creative Research Thoughts, 13(11), pp. g59-g69. Available at: https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716
IEEE — numbered reference
R. V. tumbada, P. R. Awade, A. Pawar, T. Dana and M.B.Nikam, ""Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"," IJCRT, vol. 13, no. 11, pp. g59-g69, Nov. 2025.
Vancouver — biomedical
tumbada RV, Awade PR, Pawar A, Dana T, M.B.Nikam. "Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery". IJCRT. 2025 Nov;13(11):g59-g69.
AMA — 11th edition
tumbada RV, Awade PR, Pawar A, Dana T, M.B.Nikam. "Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery". IJCRT. 2025;13(11):g59-g69. Accessed at https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716
BibTeX — Zotero, Mendeley, LaTeX
@article{IJCRT2511716, author = {Ruchit V. tumbada and Prathamesh R. Awade and Ajinkya Pawar and Tufail Dana and M.B.Nikam}, title = {"Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery"}, journal = {International Journal of Creative Research Thoughts}, volume = {13}, number = {11}, pages = {g59-g69}, year = {2025}, month = {November}, issn = {2320-2882}, url = {https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716} }
RIS — EndNote, RefWorks
TY - JOUR AU - tumbada, Ruchit V. AU - Awade, Prathamesh R. AU - Pawar, Ajinkya AU - Dana, Tufail AU - M.B.Nikam TI - "Recent Advances in Molecular Docking: From Theory to Therapeutic Discovery" T2 - International Journal of Creative Research Thoughts JA - IJCRT VL - 13 IS - 11 PY - 2025 SN - 2320-2882 UR - https://ijcrt.org/viewpaperforall.php?paper=IJCRT2511716 SP - g59-g69 ER -

Issue

Volume 13 Issue 11, November-2025
Pages : g59-g69

Article Information

Pages
g59-g69
Published
November 2025
Registration ID
IJCRT_296967
Published Paper ID
IJCRT2511716
Research Area
Pharmacy All
Author Type
Indian Author
Location
Malegaon, Maharashtra, India
Licence
CC BY 4.0 · Open Access
ISSN & Impact Factor
2320-2882 · IF 9.17
Downloads
187

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International Journal of Creative Research Thoughts Published by IJCRT Publication
2320-2882 ISSN
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© 2025 — Authors hold the copyright of this article. This work is licensed under a Creative Commons Attribution 4.0 International License and The Open Definition. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (CC BY 4.0), which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited.
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Declarations

Funding

No external funding was received for this study.

Conflict of Interest

The authors declare that they have no conflict of interest.

Acknowledgements

The authors would like to thank the reviewers and the editorial board of International Journal of Creative Research Thoughts for their careful reading and constructive comments, and all colleagues who supported the preparation of this manuscript.

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