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Paper Title
Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp.
Authors
Ashish B. Kalasava , Kruti G. Dangar , Dr. Geera P. Mankad
Keywords
Nocardiopsis; ?-amylase; Bioinformatics analysis; Protein structure modeling.
Abstract
Halophilic actinomycetes are promising candidate for extremozymes due to their ability to survive and function potential under extreme habitats. Among these, members of the genus Nocardiopsis are recognized for producing industrially important ?-amylases with multiple biotechnological potential. In the present study, a comparative bioinformatics analysis was carried out on eight ?-amylase producing protein sequences derived from Nocardiopsis alba and Nocardiopsis species retrieved from the NCBI database. Physicochemical characterization using ProtParam revealed that most amylases possess low theoretical isoelectric points (pI 4.13-4.71), enrichment of acidic and aliphatic residues, and low sulphur content, reflecting supporting features for adaptations to saline environments. Homology-based three-dimensional structural models were generated using SWISS-MODEL and evaluated through GMQE, QMEAN Z-scores, MolProbity, and Ramachandran plot analysis, promote the good structural reliability and stereochemical quality to remain functional active in saline habitats. These findings highlight will be used for their potential for applications in food processing, pharmaceuticals.
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IJCRT — journal style
"Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp.", IJCRT - International Journal of Creative Research Thoughts (www.ijcrt.org), ISSN:2320-2882, Vol.7, Issue 1, page no.491-500, February 2019, Available :https://ijcrt.org/papers/IJCRT1136209.pdf
APA — 7th edition
Kalasava, A. B., Dangar, K. G., & Mankad, G. P. (2019). Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp. International Journal of Creative Research Thoughts, 7(1), 491-500. https://doi.org/10.56975/ijcrt.v7i1.300145
MLA — 9th edition
Kalasava, Ashish B., et al. "Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp." International Journal of Creative Research Thoughts, vol. 7, no. 1, 2019, pp. 491-500, https://doi.org/10.56975/ijcrt.v7i1.300145.
Chicago — 17th, bibliography
Kalasava, Ashish B., Kruti G. Dangar, and Geera P. Mankad. "Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp." International Journal of Creative Research Thoughts 7, no. 1 (2019): 491-500. https://doi.org/10.56975/ijcrt.v7i1.300145.
Harvard — author–date
Kalasava, A.B., Dangar, K.G. and Mankad, G.P. (2019) 'Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp', International Journal of Creative Research Thoughts, 7(1), pp. 491-500. Available at: https://doi.org/10.56975/ijcrt.v7i1.300145
IEEE — numbered reference
A. B. Kalasava, K. G. Dangar and G. P. Mankad, "Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp," IJCRT, vol. 7, no. 1, pp. 491-500, Feb. 2019, doi: 10.56975/ijcrt.v7i1.300145.
Vancouver — biomedical
Kalasava AB, Dangar KG, Mankad GP. Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp. IJCRT. 2019 Feb;7(1):491-500. doi: 10.56975/ijcrt.v7i1.300145
AMA — 11th edition
Kalasava AB, Dangar KG, Mankad GP. Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp. IJCRT. 2019;7(1):491-500. doi:10.56975/ijcrt.v7i1.300145
BibTeX — Zotero, Mendeley, LaTeX
@article{IJCRT1136209,
author = {Ashish B. Kalasava and Kruti G. Dangar and Geera P. Mankad},
title = {Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp.},
journal = {International Journal of Creative Research Thoughts},
volume = {7},
number = {1},
pages = {491-500},
year = {2019},
month = {February},
issn = {2320-2882},
doi = {10.56975/ijcrt.v7i1.300145},
url = {https://doi.org/10.56975/ijcrt.v7i1.300145}
}
RIS — EndNote, RefWorks
TY - JOUR
AU - Kalasava, Ashish B.
AU - Dangar, Kruti G.
AU - Mankad, Geera P.
TI - Comparative bioinformatics analysis of halophilic ?-amylases derived from Nocardiopsis alba and Nocardiopsis sp.
T2 - International Journal of Creative Research Thoughts
JA - IJCRT
VL - 7
IS - 1
PY - 2019
SN - 2320-2882
DO - 10.56975/ijcrt.v7i1.300145
UR - https://doi.org/10.56975/ijcrt.v7i1.300145
SP - 491
EP - 500
ER -
Issue
Volume 7 Issue 1,
February-2019
Pages : 491-500
Article Information
- Pages
- 491-500
- Published
- February 2019
- Registration ID
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- Published Paper PDF
- https://ijcrt.org/papers/IJCRT1136209.pdf
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